Transcript: ENSDART00000150214.3 psmc1a-202

Description

proteasome 26S subunit, ATPase 1a [Source:NCBI gene (formerly Entrezgene);Acc:336786]

Gene Synonyms

psmc1, wu:fb05d04, zgc:56516

Location

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 1035 variant alleles and maps to 6 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000036668.6	psmc1a-201	2248	440aa	ENSDARP00000030555.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150214.3	psmc1a-202	589	94aa	ENSDARP00000124034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 589 bps, Translation length: 94 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000150214.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.