Transcript: ENSDART00000040445.7 GNPTAB-204

Description

N-acetylglucosamine-1-phosphate transferase subunits alpha and beta [Source:ZFIN;Acc:ZDB-GENE-030131-4714]

Location

Chromosome 4: 17,671,164-17,704,135 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 31 domains and features, is associated with 1018 variant alleles and maps to 219 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000030153.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000121714.5	GNPTAB-201	4815	1219aa	ENSDARP00000106477.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RGJ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000040445.7	GNPTAB-204	4202	1189aa	ENSDARP00000040444.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000101154.5	GNPTAB-202	2496	327aa	ENSDARP00000091928.3	Nonsense mediated decay	-	-
ENSDART00000132309.2	GNPTAB-203	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 4,202 bps, Translation length: 1,189 residues

Version

ENSDART00000040445.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000040445.7 GNPTAB-204

Summary

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Transcript: ENSDART00000040445.7 GNPTAB-204

Summary

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