Transcript: ENSDART00000048375.7 STMN4-202

Description

stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]

Location

About this transcript

This transcript has 7 exons, is annotated with 17 domains and features, is associated with 532 variant alleles and maps to 133 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000048375.7	STMN4-202	1075	188aa	ENSDARP00000048374.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RIC7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132426.3	STMN4-203	1758	188aa	ENSDARP00000113219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RIC7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153049.2	STMN4-201	575	21aa	ENSDARP00000127321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 1,075 bps, Translation length: 188 residues

Version

ENSDART00000048375.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.