Transcript: ENSDART00000132150.3 RPL18-202

Description

ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-040801-165]

Location

Chromosome 16: 16,977,804-16,991,799 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 186 variant alleles and maps to 150 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000029533.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000043173.8	RPL18-201	642	182aa	ENSDARP00000043172.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGL0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132150.3	RPL18-202	714	164aa	ENSDARP00000116844.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000143128.2	RPL18-203	561	166aa	ENSDARP00000117845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000191876.1	RPL18-204	549	182aa	ENSDARP00000155219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGL0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 714 bps, Translation length: 164 residues

Version

ENSDART00000132150.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000132150.3 RPL18-202

Summary

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Transcript: ENSDART00000132150.3 RPL18-202

Summary

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