Transcript: ENSDART00000144870.3 ASAP1-201

Description

ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]

Location

Chromosome 2: 32,267,898-32,352,946 reverse strand.

About this transcript

This transcript has 28 exons, is annotated with 53 domains and features, is associated with 1062 variant alleles and maps to 131 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000029463.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144870.3	ASAP1-201	3615	1132aa	ENSDARP00000120481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000169316.2	ASAP1-202	8880	1097aa	ENSDARP00000136448.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IM47	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000077151.4	ASAP1-203	3421	1077aa	ENSDARP00000071619.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DI91	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 3,615 bps, Translation length: 1,132 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000144870.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000144870.3 ASAP1-201

Summary

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Transcript: ENSDART00000144870.3 ASAP1-201

Summary

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