Transcript: ENSDART00000145436.2 atp2a2a-202

Description

ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a [Source:ZFIN;Acc:ZDB-GENE-040426-702]

Location

About this transcript

This transcript has 6 exons, is associated with 699 variant alleles and maps to 37 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000042040.8	atp2a2a-201	3724	996aa	ENSDARP00000042039.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QII7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146241.2	atp2a2a-203	3186	1042aa	ENSDARP00000113858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2BEU8	-
ENSDART00000145436.2	atp2a2a-202	798	55aa	ENSDARP00000112786.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 6, Coding exons: 1, Transcript length: 798 bps, Translation length: 55 residues

Version

ENSDART00000145436.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.