Transcript: ENSDART00000048655.8 zgc:55943-201

Description

zgc:55943 [Source:ZFIN;Acc:ZDB-GENE-040426-2013]

Location

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 319 variant alleles and maps to 253 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131613.3	zgc:55943-202	1691	113aa	ENSDARP00000122697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AZ99	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000048655.8	zgc:55943-201	1581	102aa	ENSDARP00000048654.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803B6	-
ENSDART00000137924.2	zgc:55943-203	769	113aa	ENSDARP00000121588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AZ99	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,581 bps, Translation length: 102 residues

Version

ENSDART00000048655.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.