Transcript: ENSDART00000088208.6 LRP1-201

Description

low density lipoprotein receptor-related protein 1Ab [Source:ZFIN;Acc:ZDB-GENE-030131-7126]

Location

About this transcript

This transcript has 89 exons, is annotated with 400 domains and features, is associated with 4688 variant alleles and maps to 277 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000088208.6	LRP1-201	14019	4549aa	ENSDARP00000082641.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QY34	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181420.1	LRP1-202	13650	4549aa	ENSDARP00000156401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QY34	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 89, Coding exons: 89, Transcript length: 14,019 bps, Translation length: 4,549 residues

Version

ENSDART00000088208.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.