Transcript: ENSDART00000171487.2 hycc1-203

Description

hyccin PI4KA lipid kinase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1806]

Location

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 2 variant alleles and maps to 18 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000033132.6	hycc1-201	2646	518aa	ENSDARP00000036397.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PRF6 Q6P121	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169483.2	hycc1-202	781	227aa	ENSDARP00000137015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000171487.2	hycc1-203	434	76aa	ENSDARP00000136900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 434 bps, Translation length: 76 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000171487.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.