Transcript: ENSDART00000155924.2 arhgap29a-203

Description

Rho GTPase activating protein 29a [Source:ZFIN;Acc:ZDB-GENE-030131-9510]

Location

Chromosome 24: 28,528,000-28,532,323 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 290 variant alleles and maps to 35 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000026329.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000154077.3	arhgap29a-202	4647	1319aa	ENSDARP00000129860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000018037.10	arhgap29a-201	3924	1307aa	ENSDARP00000025657.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000191121.1	arhgap29a-204	3222	1073aa	ENSDARP00000154170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000155924.2	arhgap29a-203	679	102aa	ENSDARP00000128325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 679 bps, Translation length: 102 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000155924.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000155924.2 arhgap29a-203

Summary

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Transcript: ENSDART00000155924.2 arhgap29a-203

Summary

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