Transcript: ENSDART00000143453.2 PLEKHJ1-201

Description

pleckstrin homology domain containing, family J member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2480]

Location

About this transcript

This transcript has 2 exons, is associated with 179 variant alleles and maps to 25 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000037279.8	PLEKHJ1-202	4450	158aa	ENSDARP00000029972.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191981.1	PLEKHJ1-203	207	69aa	ENSDARP00000151787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000143453.2	PLEKHJ1-201	595	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 595 bps,

Version

ENSDART00000143453.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.