Transcript: ENSDART00000169712.2 CLINT1-202

Description

clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]

Location

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 354 variant alleles and maps to 146 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000144702.3	CLINT1-201	3401	633aa	ENSDARP00000114046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187750.1	CLINT1-204	5342	644aa	ENSDARP00000155381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000169712.2	CLINT1-202	1673	94aa	ENSDARP00000129957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000143818.2	CLINT1-203	742	115aa	ENSDARP00000142283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,673 bps, Translation length: 94 residues

Version

ENSDART00000169712.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.