Transcript: ENSDART00000148933.2 RPL18A-202

Description

ribosomal protein L18a [Source:ZFIN;Acc:ZDB-GENE-040426-1071]

Location

About this transcript

This transcript has 5 exons, is associated with 857 variant alleles and maps to 142 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000030215.6	RPL18A-201	1206	176aa	ENSDARP00000038658.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZWJ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148933.2	RPL18A-202	675	76aa	ENSDARP00000123959.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 675 bps, Translation length: 76 residues

Version

ENSDART00000148933.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.