Transcript: ENSDART00000174004.2 c6ast3-202

Description

six-cysteine containing astacin protease 3 [Source:ZFIN;Acc:ZDB-GENE-050320-99]

Location

About this transcript

This transcript has 8 exons, is associated with 2 variant alleles and maps to 107 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000114934.3	c6ast3-201	920	255aa	ENSDARP00000099306.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182307.1	c6ast3-203	765	255aa	ENSDARP00000148405.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000174004.2	c6ast3-202	880	52aa	ENSDARP00000142656.1	Nonsense mediated decay	-

Summary

Statistics

Exons: 8, Coding exons: 3, Transcript length: 880 bps, Translation length: 52 residues

Version

ENSDART00000174004.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.