Transcript: ENSDART00000148886.3 PCBP4-201

Description

poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]

Location

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 495 variant alleles and maps to 21 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000137945.3	PCBP4-203	4125	464aa	ENSDARP00000118901.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000104693.5	PCBP4-204	4086	442aa	ENSDARP00000095464.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SZN9	-
ENSDART00000148681.2	PCBP4-202	650	191aa	ENSDARP00000124370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148886.3	PCBP4-201	455	152aa	ENSDARP00000123850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 455 bps, Translation length: 152 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000148886.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.