Transcript: ENSDART00000036702.5 mxd-201

Description

myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]

Location

About this transcript

This transcript has 14 exons, is annotated with 21 domains and features, is associated with 16 variant alleles and maps to 174 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000036702.5	mxd-201	2472	644aa	ENSDARP00000035196.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXF9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000181804.1	mxd-202	1845	614aa	ENSDARP00000151185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,472 bps, Translation length: 644 residues

Version

ENSDART00000036702.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.