Transcript: ENSDART00000029347.8 higd1a-201

Description

HIG1 hypoxia inducible domain family, member 1A [Source:ZFIN;Acc:ZDB-GENE-030826-15]

Location

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 208 variant alleles and maps to 177 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000029347.8	higd1a-201	1263	99aa	ENSDARP00000033361.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZZZ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179939.1	higd1a-203	3041	99aa	ENSDARP00000155624.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZZZ4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148624.2	higd1a-202	744	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,263 bps, Translation length: 99 residues

Version

ENSDART00000029347.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.