Transcript: ENSDART00000047719.6 CACNA1B-201

Description

calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44]

Location

About this transcript

This transcript has 48 exons, is annotated with 138 domains and features, is associated with 4157 variant alleles and maps to 198 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000047719.6	CACNA1B-201	6939	2312aa	ENSDARP00000047718.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BHF4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000141154.3	CACNA1B-202	6813	2270aa	ENSDARP00000114260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000171165.2	CACNA1B-203	6585	2194aa	ENSDARP00000137390.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	T2B1R0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 48, Coding exons: 48, Transcript length: 6,939 bps, Translation length: 2,312 residues

Version

ENSDART00000047719.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.