Transcript: ENSDART00000151517.2 EIF3D-203

Description

eukaryotic translation initiation factor 3, subunit D [Source:ZFIN;Acc:ZDB-GENE-030131-8442]

Location

Chromosome 3: 29,641,181-29,642,116 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 3 domains and features, is associated with 5 variant alleles and maps to 33 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000021257.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000011052.9	EIF3D-207	1811	552aa	ENSDARP00000011011.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TH15	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132298.3	EIF3D-205	1892	550aa	ENSDARP00000116681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151517.2	EIF3D-203	315	41aa	ENSDARP00000126163.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151568.2	EIF3D-206	823	60aa	ENSDARP00000126192.1	Nonsense mediated decay	-	-
ENSDART00000150898.2	EIF3D-204	740	104aa	ENSDARP00000126265.1	Nonsense mediated decay	-	-
ENSDART00000143234.2	EIF3D-202	683	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000139315.2	EIF3D-201	666	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 315 bps, Translation length: 41 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000151517.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000151517.2 EIF3D-203

Summary

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Transcript: ENSDART00000151517.2 EIF3D-203

Summary

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