Transcript: ENSDART00000147814.2 CORO1C-202

Description

coronin, actin binding protein, 1Cb [Source:ZFIN;Acc:ZDB-GENE-030131-418]

Location

Chromosome 5: 31,891,443-31,901,468 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 222 variant alleles and maps to 79 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000021193.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000191957.1	CORO1C-204	5366	474aa	ENSDARP00000145198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QI46	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141446.3	CORO1C-201	3001	474aa	ENSDARP00000113857.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QI46	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147814.2	CORO1C-202	831	196aa	ENSDARP00000117078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000140640.2	CORO1C-203	750	66aa	ENSDARP00000121763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 831 bps, Translation length: 196 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000147814.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000147814.2 CORO1C-202

Summary

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Transcript: ENSDART00000147814.2 CORO1C-202

Summary

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