Transcript: ENSDART00000143444.2 PTPRE-201

Description

protein tyrosine phosphatase receptor type Eb [Source:ZFIN;Acc:ZDB-GENE-060503-263]

Location

About this transcript

This transcript has 21 exons, is annotated with 37 domains and features, is associated with 558 variant alleles and maps to 236 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143444.2	PTPRE-201	3254	677aa	ENSDARP00000123201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1MTF9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 21, Coding exons: 19, Transcript length: 3,254 bps, Translation length: 677 residues

Version

ENSDART00000143444.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.