Transcript: ENSDART00000133134.2 EFEMP2-201

Description

EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]

Location

Chromosome 21: 25,597,513-25,604,603 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 23 domains and features and maps to 129 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000020811.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000139460.3	EFEMP2-203	3344	440aa	ENSDARP00000116946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5WQV6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000042578.7	EFEMP2-205	2034	440aa	ENSDARP00000042577.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5WQV6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133134.2	EFEMP2-201	823	182aa	ENSDARP00000122661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133521.2	EFEMP2-204	660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000142581.2	EFEMP2-202	608	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 823 bps, Translation length: 182 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000133134.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000133134.2 EFEMP2-201

Summary

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Transcript: ENSDART00000133134.2 EFEMP2-201

Summary

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