Transcript: ENSDART00000172778.2 YIF1A-203

Description

Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]

Location

Chromosome 14: 30,753,792-30,757,287 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 238 variant alleles and maps to 91 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000019636.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000137782.2	YIF1A-202	1759	307aa	ENSDARP00000115104.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PC24	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000009385.9	YIF1A-201	1528	307aa	ENSDARP00000018303.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PC24	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172778.2	YIF1A-203	719	210aa	ENSDARP00000142616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173394.2	YIF1A-204	873	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 719 bps, Translation length: 210 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000172778.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000172778.2 YIF1A-203

Summary

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Transcript: ENSDART00000172778.2 YIF1A-203

Summary

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