Transcript: ENSDART00000103660.6 CLCN7-201

Description

chloride channel 7 [Source:ZFIN;Acc:ZDB-GENE-061103-196]

Location

Chromosome 3: 27,665,160-27,696,163 forward strand.

About this transcript

This transcript has 25 exons, is annotated with 65 domains and features, is associated with 10 variant alleles and maps to 268 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000019556.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103660.6	CLCN7-201	3971	795aa	ENSDARP00000094436.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180848.1	CLCN7-205	3904	795aa	ENSDARP00000155345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000126533.2	CLCN7-206	2702	770aa	ENSDARP00000105498.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QNP3	-
ENSDART00000143074.2	CLCN7-203	853	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000145392.2	CLCN7-202	826	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000138423.2	CLCN7-204	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 3,971 bps, Translation length: 795 residues

Version

ENSDART00000103660.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000103660.6 CLCN7-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000103660.6 CLCN7-201

Summary

About Us

Get help

Our sister sites

Follow us