Transcript: ENSDART00000140876.2 cpap-201

Description

centromere protein J [Source:ZFIN;Acc:ZDB-GENE-030131-6323]

Location

About this transcript

This transcript has 15 exons, is annotated with 36 domains and features, is associated with 29 variant alleles and maps to 237 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000189026.1	cpap-202	5956	1124aa	ENSDARP00000155698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCY1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140876.2	cpap-201	3611	1124aa	ENSDARP00000117414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCY1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 3,611 bps, Translation length: 1,124 residues

Version

ENSDART00000140876.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.