Transcript: ENSDART00000102567.5 shtn2-201

Description

shootin 2 [Source:ZFIN;Acc:ZDB-GENE-130530-561]

Location

About this transcript

This transcript has 17 exons, is annotated with 19 domains and features, is associated with 1049 variant alleles and maps to 117 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102567.5	shtn2-201	1946	561aa	ENSDARP00000093343.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R1Q1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173026.2	shtn2-203	829	208aa	ENSDARP00000142175.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000172807.2	shtn2-202	795	196aa	ENSDARP00000142595.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173189.2	shtn2-204	556	182aa	ENSDARP00000142494.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 1,946 bps, Translation length: 561 residues

Version

ENSDART00000102567.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.