Transcript: ENSDART00000002930.10 phf20l1-201

Description

PHD finger protein 20 like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5837]

Location

About this transcript

This transcript has 24 exons, is annotated with 48 domains and features, is associated with 528 variant alleles and maps to 219 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000002930.10	phf20l1-201	4381	1116aa	ENSDARP00000022161.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PDN4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000176939.2	phf20l1-203	2967	988aa	ENSDARP00000144538.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000137311.2	phf20l1-202	838	209aa	ENSDARP00000118885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 24, Coding exons: 23, Transcript length: 4,381 bps, Translation length: 1,116 residues

Version

ENSDART00000002930.10

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.