Transcript: ENSDART00000155166.3 zgc:152670-203

Description

zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]

Location

About this transcript

This transcript has 11 exons, is annotated with 14 domains and features, is associated with 724 variant alleles and maps to 245 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000098146.5	zgc:152670-201	2890	490aa	ENSDARP00000088918.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Z4YHZ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155166.3	zgc:152670-203	2377	314aa	ENSDARP00000128836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000153836.2	zgc:152670-202	493	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000157037.2	zgc:152670-204	528	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,377 bps, Translation length: 314 residues

Version

ENSDART00000155166.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.