Transcript: ENSDART00000142187.2 SSRP1-201

Description

structure specific recognition protein 1b [Source:ZFIN;Acc:ZDB-GENE-041008-209]

Location

About this transcript

This transcript has 15 exons, is annotated with 26 domains and features, is associated with 504 variant alleles and maps to 185 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131296.4	SSRP1-202	2621	703aa	ENSDARP00000118787.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6NLJ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193481.1	SSRP1-204	2097	698aa	ENSDARP00000150999.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000003895.9	SSRP1-203	2052	683aa	ENSDARP00000014032.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000142187.2	SSRP1-201	1687	533aa	ENSDARP00000115037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 1,687 bps, Translation length: 533 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000142187.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

dotter confirmed [Definitions]