Transcript: ENSDART00000149394.2 SLC16A1-202

Description

solute carrier family 16 member 1a [Source:ZFIN;Acc:ZDB-GENE-110408-16]

Location

Chromosome 6: 49,021,703-49,049,019 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 44 domains and features, is associated with 904 variant alleles and maps to 133 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000016963.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000150023.3	SLC16A1-201	2439	461aa	ENSDARP00000123786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7B3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149394.2	SLC16A1-202	2429	461aa	ENSDARP00000124803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7B3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000175254.2	SLC16A1-203	1386	461aa	ENSDARP00000144244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7B3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,429 bps, Translation length: 461 residues

Version

ENSDART00000149394.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000149394.2 SLC16A1-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000149394.2 SLC16A1-202

Summary

About Us

Get help

Our sister sites

Follow us