Transcript: ENSDART00000134658.3 slc44a1a-202

Description

solute carrier family 44 member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]

Location

About this transcript

This transcript has 15 exons, is annotated with 37 domains and features, is associated with 789 variant alleles and maps to 138 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000011725.10	slc44a1a-201	2752	651aa	ENSDARP00000007186.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q9M4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134658.3	slc44a1a-202	2220	645aa	ENSDARP00000121604.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,220 bps, Translation length: 645 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000134658.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.