Transcript: ENSDART00000104539.6 LIM2-201

Description

lens intrinsic membrane protein 2.4 [Source:ZFIN;Acc:ZDB-GENE-040718-104]

Location

Chromosome 19: 10,541,772-10,554,240 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 27 domains and features, is associated with 396 variant alleles and maps to 233 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000015445.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144923.2	LIM2-202	1021	173aa	ENSDARP00000122298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DH11	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181041.1	LIM2-204	5202	197aa	ENSDARP00000145354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L960	-
ENSDART00000186815.1	LIM2-203	5130	173aa	ENSDARP00000151590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DH11	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000104539.6	LIM2-201	981	197aa	ENSDARP00000095312.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L960	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 981 bps, Translation length: 197 residues

Version

ENSDART00000104539.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000104539.6 LIM2-201

Summary

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Transcript: ENSDART00000104539.6 LIM2-201

Summary

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