Transcript: ENSDART00000147798.2 SMARCAD1-203

Description

SNF2 related chromatin remodeling ATPase with DExD box 1a [Source:ZFIN;Acc:ZDB-GENE-050522-499]

Location

Chromosome 8: 29,644,383-29,647,485 forward strand.

About this transcript

This transcript has 4 exons, is associated with 235 variant alleles and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000014041.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000091409.7	SMARCAD1-201	3644	972aa	ENSDARP00000085842.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R061	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139029.3	SMARCAD1-205	2151	385aa	ENSDARP00000118043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000133047.2	SMARCAD1-202	600	154aa	ENSDARP00000122607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000140597.2	SMARCAD1-204	491	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000147798.2	SMARCAD1-203	479	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 479 bps,

Version

ENSDART00000147798.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000147798.2 SMARCAD1-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000147798.2 SMARCAD1-203

Summary

About Us

Get help

Our sister sites

Follow us