Transcript: ENSDART00000152462.2 LRRC45-201

Description

leucine rich repeat containing 45 [Source:ZFIN;Acc:ZDB-GENE-121214-317]

Location

Chromosome 12: 3,003,970-3,008,922 forward strand.

About this transcript

This transcript has 4 exons, is associated with 219 variant alleles and maps to 17 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000014005.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000082297.6	LRRC45-202	2421	674aa	ENSDARP00000138152.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IU41	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182597.1	LRRC45-205	1995	664aa	ENSDARP00000153883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000184918.1	LRRC45-204	1956	651aa	ENSDARP00000151762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000182292.1	LRRC45-206	1917	638aa	ENSDARP00000149678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000189499.1	LRRC45-203	1734	577aa	ENSDARP00000152181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000152462.2	LRRC45-201	439	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 439 bps,

Version

ENSDART00000152462.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152462.2 LRRC45-201

Summary

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Transcript: ENSDART00000152462.2 LRRC45-201

Summary

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