Transcript: ENSDART00000082297.6 LRRC45-202

Description

leucine rich repeat containing 45 [Source:ZFIN;Acc:ZDB-GENE-121214-317]

Location

Chromosome 12: 2,993,523-3,019,847 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 23 domains and features, is associated with 571 variant alleles and maps to 159 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000014005.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000082297.6	LRRC45-202	2421	674aa	ENSDARP00000138152.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IU41	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182597.1	LRRC45-205	1995	664aa	ENSDARP00000153883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000184918.1	LRRC45-204	1956	651aa	ENSDARP00000151762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000182292.1	LRRC45-206	1917	638aa	ENSDARP00000149678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000189499.1	LRRC45-203	1734	577aa	ENSDARP00000152181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000152462.2	LRRC45-201	439	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 2,421 bps, Translation length: 674 residues

Version

ENSDART00000082297.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

non-submitted evidence [Definitions]

Transcript: ENSDART00000082297.6 LRRC45-202

Summary

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Transcript: ENSDART00000082297.6 LRRC45-202

Summary

About Us

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