Transcript: ENSDART00000114552.4 tmc5-201

Description

transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]

Location

About this transcript

This transcript has 18 exons, is annotated with 34 domains and features, is associated with 6 variant alleles and maps to 149 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000114552.4	tmc5-201	2720	685aa	ENSDARP00000101972.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FDU7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155705.2	tmc5-202	628	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,720 bps, Translation length: 685 residues

Version

ENSDART00000114552.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.