Transcript: ENSDART00000143425.3 EYA4-201

Description

EYA transcriptional coactivator and phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-050327-93]

Location

Chromosome 23: 31,440,115-31,512,497 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 18 domains and features, is associated with 1077 variant alleles and maps to 276 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000012397.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000158755.2	EYA4-205	2890	638aa	ENSDARP00000130998.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IA41	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000143425.3	EYA4-201	2414	613aa	ENSDARP00000122519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000131352.3	EYA4-202	1974	613aa	ENSDARP00000113606.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIR1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000138625.3	EYA4-203	1911	636aa	ENSDARP00000113103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGZ3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000133002.2	EYA4-204	1911	636aa	ENSDARP00000115424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 2,414 bps, Translation length: 613 residues

Version

ENSDART00000143425.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143425.3 EYA4-201

Summary

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Transcript: ENSDART00000143425.3 EYA4-201

Summary

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