Transcript: ENSDART00000129975.3 scamp4-202

Description

secretory carrier membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050913-40]

Gene Synonyms

si:ch211-129c21.2, zgc:114143

Location

About this transcript

This transcript has 6 exons, is annotated with 17 domains and features, is associated with 525 variant alleles and maps to 205 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000129975.3	scamp4-202	3885	231aa	ENSDARP00000105358.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V8U2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000049434.7	scamp4-201	881	231aa	ENSDARP00000049433.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V8U2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,885 bps, Translation length: 231 residues

Version

ENSDART00000129975.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.