Transcript: ENSDART00000151569.2 dlg1a-204

Description

discs large MAGUK scaffold protein 1a [Source:ZFIN;Acc:ZDB-GENE-010724-8]

Location

About this transcript

This transcript has 4 exons, is associated with 777 variant alleles and maps to 58 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000028406.10	dlg1a-201	5039	909aa	ENSDARP00000036537.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000166782.2	dlg1a-205	2888	873aa	ENSDARP00000140987.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000169687.2	dlg1a-206	2280	759aa	ENSDARP00000134848.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000132170.3	dlg1a-202	704	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000137198.2	dlg1a-203	468	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000151569.2	dlg1a-204	669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 669 bps,

Version

ENSDART00000151569.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.