Transcript: ENSDART00000152155.2 PAPOLA-202

Description

poly(A) polymerase alpha [Source:ZFIN;Acc:ZDB-GENE-030131-3507]

Location

Chromosome 20: 4,728,411-4,731,155 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 246 variant alleles and maps to 32 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000009585.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000053858.7	PAPOLA-205	3471	723aa	ENSDARP00000053857.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5SNY2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000125620.4	PAPOLA-204	1610	449aa	ENSDARP00000106710.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000050201.7	PAPOLA-206	1559	283aa	ENSDARP00000050200.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000152559.2	PAPOLA-203	710	189aa	ENSDARP00000126748.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152155.2	PAPOLA-202	639	107aa	ENSDARP00000126606.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000124899.3	PAPOLA-201	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 639 bps, Translation length: 107 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000152155.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152155.2 PAPOLA-202

Summary

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Transcript: ENSDART00000152155.2 PAPOLA-202

Summary

About Us

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