Transcript: ENSDART00000041412.9 smarca2-201

Description

SWI/SNF related BAF chromatin remodeling complex subunit ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5964]

Location

About this transcript

This transcript has 34 exons, is annotated with 74 domains and features, is associated with 2953 variant alleles and maps to 397 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000041412.9	smarca2-201	6051	1568aa	ENSDARP00000041411.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1MTE3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172702.3	smarca2-204	4830	1604aa	ENSDARP00000133519.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000113738.5	smarca2-202	823	258aa	ENSDARP00000102553.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136002.3	smarca2-203	663	170aa	ENSDARP00000112752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 34, Coding exons: 33, Transcript length: 6,051 bps, Translation length: 1,568 residues

Version

ENSDART00000041412.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.