Transcript: ENSDART00000135814.3 PANK1-203

Description

pantothenate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2846]

Location

About this transcript

This transcript has 3 exons, is annotated with 12 domains and features, is associated with 272 variant alleles and maps to 127 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146787.3	PANK1-201	2165	373aa	ENSDARP00000112870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QB40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135814.3	PANK1-203	1084	266aa	ENSDARP00000116047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143508.2	PANK1-202	687	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,084 bps, Translation length: 266 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000135814.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.