Transcript: ENSDART00000166807.2 tra2a-207

Description

transformer 2 alpha homolog [Source:NCBI gene (formerly Entrezgene);Acc:393388]

Location

Chromosome 19: 20,177,208-20,191,378 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 17 domains and features, is associated with 433 variant alleles and maps to 170 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000007863.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000008595.11	tra2a-201	1486	297aa	ENSDARP00000010426.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T2A0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000166807.2	tra2a-207	2920	298aa	ENSDARP00000129899.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000145115.4	tra2a-204	984	200aa	ENSDARP00000126060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151175.2	tra2a-206	809	200aa	ENSDARP00000126162.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133873.2	tra2a-202	1043	98aa	ENSDARP00000126113.1	Nonsense mediated decay	-	-
ENSDART00000145225.3	tra2a-205	743	98aa	ENSDARP00000126020.1	Nonsense mediated decay	-	-
ENSDART00000143221.2	tra2a-203	701	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,920 bps, Translation length: 298 residues

Version

ENSDART00000166807.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000166807.2 tra2a-207

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000166807.2 tra2a-207

Summary

About Us

Get help

Our sister sites

Follow us