Transcript: ENSDART00000140980.2 sema3bl-202

Description

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:NCBI gene (formerly Entrezgene);Acc:100004611]

Gene Synonyms

fc22d04, si:ch211-106g4.1, wu:fc22d04

Location

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 341 variant alleles and maps to 147 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000046863.9	sema3bl-201	3253	771aa	ENSDARP00000046862.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MM97	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140980.2	sema3bl-202	546	182aa	ENSDARP00000119482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 546 bps, Translation length: 182 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000140980.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.