Transcript: ENSDART00000036779.8 TMEM178B-201

Description

transmembrane protein 178Bb [Source:ZFIN;Acc:ZDB-GENE-040718-92]

Location

About this transcript

This transcript has 5 exons, is annotated with 26 domains and features, is associated with 354 variant alleles and maps to 284 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000036779.8	TMEM178B-201	10605	294aa	ENSDARP00000036408.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8F4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182399.1	TMEM178B-202	1052	294aa	ENSDARP00000154510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8F4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 10,605 bps, Translation length: 294 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q1L8F4

Version

ENSDART00000036779.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]