Transcript: ENSDART00000014046.8 SPECC1L-201

Description

sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]

Location

About this transcript

This transcript has 16 exons, is annotated with 39 domains and features, is associated with 1275 variant alleles and maps to 143 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000014046.8	SPECC1L-201	3950	1132aa	ENSDARP00000010292.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2KN93	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164976.2	SPECC1L-202	7167	1132aa	ENSDARP00000135296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2KN93	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,950 bps, Translation length: 1,132 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q2KN93

Version

ENSDART00000014046.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.