Transcript: ENSDART00000139697.2 ATP6V1H-204

Description

ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]

Location

About this transcript

This transcript has 3 exons, is associated with 424 variant alleles and maps to 37 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145681.2	ATP6V1H-203	1496	481aa	ENSDARP00000113453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R0V8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000189233.1	ATP6V1H-205	1851	481aa	ENSDARP00000146642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R0V8	-
ENSDART00000019029.8	ATP6V1H-201	1755	463aa	ENSDARP00000024886.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PC35	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138122.3	ATP6V1H-202	564	103aa	ENSDARP00000124373.1	Nonsense mediated decay	-	-
ENSDART00000139697.2	ATP6V1H-204	717	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 717 bps,

Version

ENSDART00000139697.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.