Transcript: ENSDART00000148525.3 chrd-202

Description

chordin [Source:ZFIN;Acc:ZDB-GENE-990415-33]

Location

About this transcript

This transcript has 18 exons, is annotated with 38 domains and features, is associated with 549 variant alleles and maps to 149 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000045110.8	chrd-201	4558	940aa	ENSDARP00000045109.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QKY4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148525.3	chrd-202	3096	863aa	ENSDARP00000124241.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 3,096 bps, Translation length: 863 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000148525.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.