Transcript: ENSDART00000159344.2 RHOU-201

Description

si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]

Location

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 248 variant alleles and maps to 138 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000003097.8	RHOU-202	1491	252aa	ENSDARP00000019782.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7Z2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167720.2	RHOU-203	759	252aa	ENSDARP00000132697.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7Z2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000159344.2	RHOU-201	1422	252aa	ENSDARP00000139507.1	Nonsense mediated decay	E7F7Z2	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,422 bps, Translation length: 252 residues

Version

ENSDART00000159344.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.