Transcript: ENSDART00000003665.8 UCMA-202

Description

upper zone of growth plate and cartilage matrix associated b [Source:ZFIN;Acc:ZDB-GENE-040426-2368]

Location

About this transcript

This transcript has 5 exons, is associated with 1 variant allele and maps to 68 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000171904.2	UCMA-201	1347	135aa	ENSDARP00000135381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7NRG1 Q6NWB6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000003665.8	UCMA-202	544	77aa	ENSDARP00000026630.6	Nonsense mediated decay	-	-
ENSDART00000164346.2	UCMA-203	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 544 bps, Translation length: 77 residues

Version

ENSDART00000003665.8

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.